A library for working with phylogenetic data.
v0.25.0
population.hpp
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1 #ifndef GENESIS_POPULATION_H_
2 #define GENESIS_POPULATION_H_
3 
4 /*
5  Genesis - A toolkit for working with phylogenetic data.
6  Copyright (C) 2014-2021 Lucas Czech
7 
8  This program is free software: you can redistribute it and/or modify
9  it under the terms of the GNU General Public License as published by
10  the Free Software Foundation, either version 3 of the License, or
11  (at your option) any later version.
12 
13  This program is distributed in the hope that it will be useful,
14  but WITHOUT ANY WARRANTY; without even the implied warranty of
15  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16  GNU General Public License for more details.
17 
18  You should have received a copy of the GNU General Public License
19  along with this program. If not, see <http://www.gnu.org/licenses/>.
20 
21  Contact:
22  Lucas Czech <lczech@carnegiescience.edu>
23  Department of Plant Biology, Carnegie Institution For Science
24  260 Panama Street, Stanford, CA 94305, USA
25 */
26 
62 
63 #endif // include guard
variant.hpp
base_counts.hpp
vcf_window.hpp
sync_reader.hpp
heatmap_colorization.hpp
structure.hpp
vcf_header.hpp
genome_heatmap.hpp
diversity.hpp
genome_region.hpp
af_spectrum.hpp
simple_pileup_input_iterator.hpp
vcf_common.hpp
hts_file.hpp
simple_pileup_reader.hpp
vcf_format_iterator.hpp
base_counts.hpp
sliding_window_iterator.hpp
window.hpp
vcf_input_iterator.hpp
gff_reader.hpp
variant.hpp
vcf_record.hpp
genome_region.hpp
sync_input_iterator.hpp
sliding_window_generator.hpp