A toolkit for working with phylogenetic data.
v0.18.0
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
placement/function/tree.cpp File Reference
#include "genesis/placement/function/tree.hpp"
#include "genesis/placement/function/helper.hpp"
#include "genesis/tree/default/operators.hpp"
#include "genesis/tree/default/tree.hpp"
#include "genesis/tree/function/manipulation.hpp"
#include "genesis/tree/function/operators.hpp"
#include "genesis/tree/tree.hpp"
#include <algorithm>
#include <cassert>
#include <numeric>
#include <stdexcept>
#include <utility>
#include <vector>

Go to the source code of this file.

Namespaces

 genesis
 Container namespace for all symbols of genesis in order to keep them separate when used as a library.
 
 genesis::placement
 

Functions

tree::Tree labelled_tree (Sample const &sample, bool fully_resolve=false, std::string const &name_prefix="")
 Produce a Tree where the most probable PqueryPlacement of each Pquery in a Sample is turned into an Edge. More...
 
tree::Tree labelled_tree (Sample const &sample, tree::Tree const &tree, bool fully_resolve=false, std::string const &name_prefix="")
 Produce a Tree where each PqueryPlacement of a Sample is turned into an Edge. More...