A library for working with phylogenetic and population genetic data.
v0.32.0
tree/common_tree/operators.hpp
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#ifndef GENESIS_TREE_COMMON_TREE_OPERATORS_H_
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#define GENESIS_TREE_COMMON_TREE_OPERATORS_H_
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/*
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Genesis - A toolkit for working with phylogenetic data.
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Copyright (C) 2014-2018 Lucas Czech and HITS gGmbH
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This program is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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This program is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with this program. If not, see <http://www.gnu.org/licenses/>.
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Contact:
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Lucas Czech <lucas.czech@h-its.org>
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Exelixis Lab, Heidelberg Institute for Theoretical Studies
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Schloss-Wolfsbrunnenweg 35, D-69118 Heidelberg, Germany
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*/
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namespace
genesis
{
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namespace
tree {
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// =================================================================================================
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// Forward Declarations
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// =================================================================================================
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class
Tree;
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class
CommonNodeData;
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class
CommonEdgeData;
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using
CommonTree
= Tree;
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// =================================================================================================
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// Comparison and Conversion
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// =================================================================================================
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bool
equal_common_trees
(
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Tree
const
& lhs,
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Tree
const
& rhs,
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bool
compare_node_names =
true
,
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bool
compare_branch_lengths =
true
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);
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CommonTree
convert_to_common_tree
( Tree
const
& source_tree );
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}
// namespace tree
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}
// namespace genesis
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#endif // include guard
genesis::tree::equal_common_trees
bool equal_common_trees(Tree const &lhs, Tree const &rhs, bool compare_node_names, bool compare_branch_lengths)
Compare two CommonTrees, that is, check whether they have identical topology, node names,...
Definition:
tree/common_tree/operators.cpp:46
genesis::tree::convert_to_common_tree
CommonTree convert_to_common_tree(Tree const &source_tree)
Convert a Tree to a CommonTree with CommonNodeData and CommonEdgeData.
Definition:
tree/common_tree/operators.cpp:95
genesis::tree::CommonTree
Tree CommonTree
Alias for a Tree with data types CommonNodeData and CommonEdgeData.
Definition:
placement/function/distances.hpp:55
genesis
Container namespace for all symbols of genesis in order to keep them separate when used as a library.
Definition:
placement/formats/edge_color.cpp:42
lib
genesis
tree
common_tree
operators.hpp
Generated on Mon Aug 5 2024 16:57:52 for genesis by
1.8.17