A library for working with phylogenetic and population genetic data.
v0.32.0
tree/formats/table/reader.hpp
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1 #ifndef GENESIS_TREE_FORMATS_TABLE_READER_H_
2 #define GENESIS_TREE_FORMATS_TABLE_READER_H_
3 
4 /*
5  Genesis - A toolkit for working with phylogenetic data.
6  Copyright (C) 2014-2024 Lucas Czech
7 
8  This program is free software: you can redistribute it and/or modify
9  it under the terms of the GNU General Public License as published by
10  the Free Software Foundation, either version 3 of the License, or
11  (at your option) any later version.
12 
13  This program is distributed in the hope that it will be useful,
14  but WITHOUT ANY WARRANTY; without even the implied warranty of
15  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16  GNU General Public License for more details.
17 
18  You should have received a copy of the GNU General Public License
19  along with this program. If not, see <http://www.gnu.org/licenses/>.
20 
21  Contact:
22  Lucas Czech <lucas.czech@sund.ku.dk>
23  University of Copenhagen, Globe Institute, Section for GeoGenetics
24  Oster Voldgade 5-7, 1350 Copenhagen K, Denmark
25 */
26 
34 #include "genesis/tree/tree.hpp"
35 
36 #include <string>
37 #include <utility>
38 #include <vector>
39 
40 namespace genesis {
41 namespace tree {
42 
43 // =================================================================================================
44 // Table Reader
45 // =================================================================================================
46 
54  std::vector<std::string> const& child_names,
55  std::vector<std::string> const& parent_names
56 );
57 
58 } // namespace tree
59 } // namespace genesis
60 
61 #endif // include guard
genesis::tree::make_tree_from_parents_table
Tree make_tree_from_parents_table(std::vector< std::string > const &child_names, std::vector< std::string > const &parent_names)
Create a tree, given lists of child parent pairs.
Definition: tree/formats/table/reader.cpp:170
tree.hpp
Header of Tree class.
genesis
Container namespace for all symbols of genesis in order to keep them separate when used as a library.
Definition: placement/formats/edge_color.cpp:42