A toolkit for working with phylogenetic data.
v0.24.0
phylo_ilr.hpp File Reference

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Namespaces

 genesis
 Container namespace for all symbols of genesis in order to keep them separate when used as a library.
 
 genesis::tree
 

Functions

utils::Matrix< double > edge_balances (BalanceData const &data, bool reverse_signs=false)
 Calculate edge balances using the Isometric Log Ratio transformation. More...
 
utils::Matrix< double > phylogenetic_ilr_transform (BalanceData const &data, bool reverse_signs=false)
 Calculate the Phylogenetic Isometric Log Ratio transformation. More...