A toolkit for working with phylogenetic data.
v0.24.0
glm.cpp File Reference
#include "genesis/utils/math/regression/glm.hpp"
#include "genesis/utils/core/logging.hpp"
#include "genesis/utils/math/common.hpp"
#include "genesis/utils/math/regression/family.hpp"
#include "genesis/utils/math/regression/helper.hpp"
#include <algorithm>
#include <cassert>
#include <cmath>
#include <cstdio>
#include <cstdlib>
#include <cstring>
#include <functional>
#include <limits>
#include <stdexcept>

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Namespaces

 genesis
 Container namespace for all symbols of genesis in order to keep them separate when used as a library.
 
 genesis::utils
 

Functions

GlmOutput glm_fit (Matrix< double > const &x_predictors, std::vector< double > const &y_response, GlmFamily const &family, GlmLink const &link, GlmExtras const &extras={}, GlmControl const &control={})
 Fit a Generalized Linear Model (GLM). More...
 
GlmOutput glm_fit (Matrix< double > const &x_predictors, std::vector< double > const &y_response, GlmFamily const &family, GlmExtras const &extras={}, GlmControl const &control={})
 Fit a Generalized Linear Model (GLM). More...
 
GlmOutput glm_fit (Matrix< double > const &x_predictors, std::vector< double > const &y_response, GlmExtras const &extras={}, GlmControl const &control={})
 Fit a Generalized Linear Model (GLM) using a linear gaussian model. More...
 
static void glm_gaussian_ (Matrix< double > const &x_predictors, std::vector< double > const &y_response, GlmExtras const &extras, GlmControl const &control, GlmFreedom const &freedom, GlmOutput &result)
 
static void glm_irls_ (Matrix< double > const &x_predictors, std::vector< double > const &y_response, GlmFamily const &family, GlmLink const &link, GlmExtras const &extras, GlmControl const &control, GlmOutput &result)