cog.cpp File Reference

#include "genesis/placement/function/cog.hpp"
#include "genesis/placement/function/functions.hpp"
#include "genesis/placement/function/helper.hpp"
#include "genesis/placement/function/operators.hpp"
#include "genesis/placement/sample.hpp"
#include "genesis/tree/common_tree/distances.hpp"
#include "genesis/tree/function/distances.hpp"
#include "genesis/tree/function/operators.hpp"
#include "genesis/tree/iterator/node_links.hpp"
#include "genesis/tree/iterator/postorder.hpp"
#include "genesis/tree/tree.hpp"
#include "genesis/utils/core/logging.hpp"
#include <algorithm>
#include <cassert>

Go to the source code of this file.

Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::placement

Functions
std::pair< PlacementTreeEdge const *, double >	center_of_gravity (Sample const &smp, bool const with_pendant_length=false)
	Calculate the Center of Gravity of the placements on a tree. More...
double	center_of_gravity_distance (Sample const &smp_a, Sample const &smp_b, bool const with_pendant_length=false)
	Calculate the distance between the two Centers of Gravity of two Samples. More...
double	center_of_gravity_variance (Sample const &smp, bool const with_pendant_length=false)
	Calculate the variance of the PqueryPlacements of a Sample around its Center of Gravity. More...