simple_tree.hpp File Reference

#include "genesis/tree/tree.hpp"
#include "genesis/tree/common_tree/tree.hpp"
#include "genesis/tree/function/operators.hpp"
#include <string>
#include <vector>

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Classes
class	SimpleNewickEdgeData
	Data class for SimpleNewickTreeEdges. More...
class	SimpleNewickNodeData
	Data class for SimpleNewickTreeNodes. More...

Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::tree

Typedefs
using	SimpleNewickTree = Tree
	Alias for a Tree that stores TreeNodes and TreeEdges with the standard Newick elements on them. More...
using	SimpleNewickTreeEdge = TreeEdge
	Alias for a TreeEdge of an SimpleNewickTree. See there for more information. More...
using	SimpleNewickTreeLink = TreeLink
	Alias for a TreeLink of an SimpleNewickTree. See there for more information. More...
using	SimpleNewickTreeNode = TreeNode
	Alias for a TreeNode of an SimpleNewickTree. See there for more information. More...

Functions
SimpleNewickTree	convert_common_tree_to_simple_newick_tree (CommonTree const &source)
	Helper function that takes a CommonTree (or any Tree with Node and Edge data derived from it) and turns its data into an SimpleNewickTree, that is, a Tree with SimpleNewickNodeData and SimpleNewickEdgeData. More...