phylo_ilr.hpp File Reference

#include "genesis/tree/mass_tree/balances.hpp"
#include "genesis/utils/containers/matrix.hpp"
#include <vector>

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Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::tree

Functions
utils::Matrix< double >	edge_balances (BalanceData const &data, bool reverse_signs=false)
	Calculate edge balances using the Isometric Log Ratio transformation. More...
utils::Matrix< double >	phylogenetic_ilr_transform (BalanceData const &data, bool reverse_signs=false)
	Calculate the Phylogenetic Isometric Log Ratio transformation. More...