fst_pool_unbiased.hpp File Reference

#include "genesis/population/filter/filter_stats.hpp"
#include "genesis/population/filter/filter_status.hpp"
#include "genesis/population/filter/sample_counts_filter.hpp"
#include "genesis/population/filter/variant_filter.hpp"
#include "genesis/population/function/fst_pool_calculator.hpp"
#include "genesis/population/function/functions.hpp"
#include "genesis/population/function/window_average.hpp"
#include "genesis/population/genome_locus_set.hpp"
#include "genesis/population/window/base_window.hpp"
#include "genesis/utils/core/std.hpp"
#include "genesis/utils/math/common.hpp"
#include "genesis/utils/math/compensated_sum.hpp"
#include "genesis/utils/text/string.hpp"
#include <cassert>
#include <cmath>
#include <limits>
#include <memory>
#include <stdexcept>
#include <string>
#include <tuple>
#include <utility>
#include <vector>

Go to the source code of this file.

Classes
class	FstPoolCalculatorUnbiased
	Compute our unbiased F_ST statistic for pool-sequenced data for two ranges of SampleCountss. More...
struct	FstPoolCalculatorUnbiased::PiValues

Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::population

Functions
FstPoolCalculatorUnbiased::Estimator	fst_pool_unbiased_estimator_from_string (std::string const &str)
std::string	fst_pool_unbiased_estimator_to_string (FstPoolCalculatorUnbiased::Estimator estimator)