A library for working with phylogenetic data. v0.25.0

#include <genesis/population/formats/simple_pileup_reader.hpp>

## Detailed Description

Single line/record from a pileup file.

A line consists of a chromosome and position, the reference base at that position, as well as one or more Samples, that is, information on reads (and optionally, their quality scores) that cover that position. See Sample for details on the latter.

Definition at line 141 of file simple_pileup_reader.hpp.

## Public Attributes

std::string chromosome

size_t position

char reference_base

std::vector< Samplesamples

## ◆ chromosome

 std::string chromosome

Definition at line 143 of file simple_pileup_reader.hpp.

## ◆ position

 size_t position

Definition at line 144 of file simple_pileup_reader.hpp.

## ◆ reference_base

 char reference_base

Definition at line 145 of file simple_pileup_reader.hpp.

## ◆ samples

 std::vector samples

Definition at line 146 of file simple_pileup_reader.hpp.

The documentation for this struct was generated from the following file: