A library for working with phylogenetic data.
v0.25.0
PoolDiversityResults Struct Reference

#include <genesis/population/functions/diversity.hpp>

Detailed Description

Data struct to collect all diversity statistics computed by pool_diversity_measures().

Definition at line 90 of file diversity.hpp.

Public Attributes

size_t coverage_count = 0
 
double coverage_fraction = 0.0
 
size_t snp_count = 0
 
double tajima_d = 0
 
double theta_pi_absolute = 0
 
double theta_pi_relative = 0
 
double theta_watterson_absolute = 0
 
double theta_watterson_relative = 0
 
size_t variant_count = 0
 

Member Data Documentation

◆ coverage_count

size_t coverage_count = 0

Definition at line 100 of file diversity.hpp.

◆ coverage_fraction

double coverage_fraction = 0.0

Definition at line 101 of file diversity.hpp.

◆ snp_count

size_t snp_count = 0

Definition at line 99 of file diversity.hpp.

◆ tajima_d

double tajima_d = 0

Definition at line 96 of file diversity.hpp.

◆ theta_pi_absolute

double theta_pi_absolute = 0

Definition at line 92 of file diversity.hpp.

◆ theta_pi_relative

double theta_pi_relative = 0

Definition at line 93 of file diversity.hpp.

◆ theta_watterson_absolute

double theta_watterson_absolute = 0

Definition at line 94 of file diversity.hpp.

◆ theta_watterson_relative

double theta_watterson_relative = 0

Definition at line 95 of file diversity.hpp.

◆ variant_count

size_t variant_count = 0

Definition at line 98 of file diversity.hpp.


The documentation for this struct was generated from the following file: