FstCathedralPlotRecord Struct Reference

#include <genesis/population/function/fst_cathedral.hpp>

Inherits CathedralPlotRecord.

Detailed Description

Data for making one FST cathedral plot, that is, one pair of samples and one chromosome.

We only offer this plot for our two unbiased estimators, but not for the Kofler and Karlsson estimators. Hence, we keep the per position pi values here, so that they can then be accumulated into the per-pixel values for the plot later.

Definition at line 74 of file fst_cathedral.hpp.

Public Attributes
std::vector< Entry >	entries
FstPoolCalculatorUnbiased::Estimator	fst_estimator
std::string	sample_name_1
std::string	sample_name_2
Public Attributes inherited from CathedralPlotRecord
size_t	chromosome_length = 0
std::string	chromosome_name
CathedralPlotParameters	parameters
std::string	plot_name
std::string	title
genesis::utils::Matrix< double >	value_matrix
std::vector< double >	window_widths

Classes
struct	Entry

Additional Inherited Members
Public Member Functions inherited from CathedralPlotRecord
virtual	~CathedralPlotRecord ()=default

Member Data Documentation

entries

std::vector<Entry> entries

Definition at line 92 of file fst_cathedral.hpp.

fst_estimator

FstPoolCalculatorUnbiased::Estimator fst_estimator

Definition at line 101 of file fst_cathedral.hpp.

sample_name_1

std::string sample_name_1

Definition at line 95 of file fst_cathedral.hpp.

sample_name_2

std::string sample_name_2

Definition at line 96 of file fst_cathedral.hpp.

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The documentation for this struct was generated from the following file:

• fst_cathedral.hpp