A library for working with phylogenetic and population genetic data.
v0.27.0
placement.hpp
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1 #ifndef GENESIS_PLACEMENT_H_
2 #define GENESIS_PLACEMENT_H_
3 
4 /*
5  Genesis - A toolkit for working with phylogenetic data.
6  Copyright (C) 2014-2022 Lucas Czech
7 
8  This program is free software: you can redistribute it and/or modify
9  it under the terms of the GNU General Public License as published by
10  the Free Software Foundation, either version 3 of the License, or
11  (at your option) any later version.
12 
13  This program is distributed in the hope that it will be useful,
14  but WITHOUT ANY WARRANTY; without even the implied warranty of
15  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16  GNU General Public License for more details.
17 
18  You should have received a copy of the GNU General Public License
19  along with this program. If not, see <http://www.gnu.org/licenses/>.
20 
21  Contact:
22  Lucas Czech <lczech@carnegiescience.edu>
23  Department of Plant Biology, Carnegie Institution For Science
24  260 Panama Street, Stanford, CA 94305, USA
25 */
26 
65 
66 #endif // include guard
placement.hpp
Header of PqueryPlacement class.
placement_tree.hpp
pquery.hpp
manipulation.hpp
emd.hpp
name.hpp
distances.hpp
sample_set.hpp
functions.hpp
Provides functions for working with Placements and Pqueries.
distributions.hpp
newick_reader.hpp
jplace_reader.hpp
simulator.hpp
edge_color.hpp
epca.hpp
jplace_writer.hpp
measures.hpp
Header for Placement Measures functions.
masses.hpp
newick_writer.hpp
operators.hpp
functions.hpp
nhd.hpp
cog.hpp
plain.hpp
Header of PqueryPlain class.
tree.hpp
sample.hpp
sample_set.hpp
serializer.hpp
Header of SampleSerializer class.
helper.hpp