A toolkit for working with phylogenetic data.
v0.24.0
placement.hpp
Go to the documentation of this file.
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#ifndef GENESIS_PLACEMENT_H_
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#define GENESIS_PLACEMENT_H_
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/*
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Genesis - A toolkit for working with phylogenetic data.
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Copyright (C) 2014-2020 Lucas Czech and HITS gGmbH
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This program is free software: you can redistribute it and/or modify
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it under the terms of the GNU General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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This program is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU General Public License for more details.
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You should have received a copy of the GNU General Public License
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along with this program. If not, see <http://www.gnu.org/licenses/>.
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Contact:
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Lucas Czech <lucas.czech@h-its.org>
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Exelixis Lab, Heidelberg Institute for Theoretical Studies
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Schloss-Wolfsbrunnenweg 35, D-69118 Heidelberg, Germany
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*/
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#include "
genesis/placement/formats/edge_color.hpp
"
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#include "
genesis/placement/formats/jplace_reader.hpp
"
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#include "
genesis/placement/formats/jplace_writer.hpp
"
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#include "
genesis/placement/formats/newick_reader.hpp
"
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#include "
genesis/placement/formats/newick_writer.hpp
"
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#include "
genesis/placement/formats/serializer.hpp
"
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#include "
genesis/placement/function/cog.hpp
"
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#include "
genesis/placement/function/distances.hpp
"
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#include "
genesis/placement/function/emd.hpp
"
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#include "
genesis/placement/function/epca.hpp
"
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#include "
genesis/placement/function/functions.hpp
"
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#include "
genesis/placement/function/helper.hpp
"
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#include "
genesis/placement/function/manipulation.hpp
"
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#include "
genesis/placement/function/masses.hpp
"
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#include "
genesis/placement/function/measures.hpp
"
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#include "
genesis/placement/function/nhd.hpp
"
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#include "
genesis/placement/function/operators.hpp
"
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#include "
genesis/placement/function/sample_set.hpp
"
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#include "
genesis/placement/function/tree.hpp
"
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#include "
genesis/placement/placement_tree.hpp
"
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#include "
genesis/placement/pquery.hpp
"
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#include "
genesis/placement/pquery/name.hpp
"
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#include "
genesis/placement/pquery/placement.hpp
"
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#include "
genesis/placement/pquery/plain.hpp
"
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#include "
genesis/placement/sample.hpp
"
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#include "
genesis/placement/sample_set.hpp
"
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#include "
genesis/placement/simulator/distributions.hpp
"
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#include "
genesis/placement/simulator/functions.hpp
"
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#include "
genesis/placement/simulator/simulator.hpp
"
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#endif // include guard
sample_set.hpp
distributions.hpp
helper.hpp
manipulation.hpp
newick_reader.hpp
placement_tree.hpp
epca.hpp
functions.hpp
Provides functions for working with Placements and Pqueries.
sample.hpp
operators.hpp
jplace_reader.hpp
jplace_writer.hpp
masses.hpp
simulator.hpp
edge_color.hpp
emd.hpp
distances.hpp
plain.hpp
Header of PqueryPlain class.
sample_set.hpp
newick_writer.hpp
nhd.hpp
cog.hpp
functions.hpp
name.hpp
tree.hpp
pquery.hpp
placement.hpp
Header of PqueryPlacement class.
serializer.hpp
Header of SampleSerializer class.
measures.hpp
Header for Placement Measures functions.
lib
genesis
placement.hpp
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