A library for working with phylogenetic and population genetic data.
v0.32.0
gzip.hpp
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1 #ifndef GENESIS_UTILS_IO_GZIP_H_
2 #define GENESIS_UTILS_IO_GZIP_H_
3 
4 /*
5  Genesis - A toolkit for working with phylogenetic data.
6  Copyright (C) 2014-2023 Lucas Czech
7 
8  This program is free software: you can redistribute it and/or modify
9  it under the terms of the GNU General Public License as published by
10  the Free Software Foundation, either version 3 of the License, or
11  (at your option) any later version.
12 
13  This program is distributed in the hope that it will be useful,
14  but WITHOUT ANY WARRANTY; without even the implied warranty of
15  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16  GNU General Public License for more details.
17 
18  You should have received a copy of the GNU General Public License
19  along with this program. If not, see <http://www.gnu.org/licenses/>.
20 
21  Contact:
22  Lucas Czech <lczech@carnegiescience.edu>
23  Department of Plant Biology, Carnegie Institution For Science
24  260 Panama Street, Stanford, CA 94305, USA
25 */
26 
35 
36 #include <stdexcept>
37 #include <string>
38 
39 namespace genesis {
40 namespace utils {
41 
42 // ================================================================================================
43 // General gzip/zlib Functions
44 // ================================================================================================
45 
53 bool is_gzip_compressed_file( std::string const& file_name );
54 
55 // ================================================================================================
56 // Gzip Exception Class
57 // ================================================================================================
58 
64 class GzipError
65  : public IOError
66 {
67 public:
68 
69  GzipError( std::string const& z_stream_message, int error_code );
70 
71  GzipError( std::string const msg )
72  : IOError(msg)
73  {}
74 
75 };
76 
77 } // namespace utils
78 } // namespace genesis
79 
80 #endif // include guard
genesis::utils::GzipError::GzipError
GzipError(std::string const msg)
Definition: gzip.hpp:71
genesis::utils::GzipError::GzipError
GzipError(std::string const &z_stream_message, int error_code)
Definition: gzip.cpp:108
genesis::utils::GzipError
Exception class thrown by failed gzip/zlib operations.
Definition: gzip.hpp:64
genesis::utils::is_gzip_compressed_file
bool is_gzip_compressed_file(std::string const &file_name)
Return whether a given file is gzip-compressed.
Definition: gzip.cpp:58
genesis::utils::IOError
Exception class for general input/output errors.
Definition: exception.hpp:79
genesis
Container namespace for all symbols of genesis in order to keep them separate when used as a library.
Definition: placement/formats/edge_color.cpp:42
exception.hpp