functions/genome_locus.hpp File Reference

#include "genesis/population/genome_locus.hpp"
#include <cassert>
#include <iostream>
#include <string>
#include <stdexcept>

Go to the source code of this file.

Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::population

Functions
int	locus_compare (GenomeLocus const &l, GenomeLocus const &r)
	Three-way comparison (spaceship operator <=>) for two loci in a genome. More...
int	locus_compare (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Three-way comparison (spaceship operator <=>) for two loci in a genome. More...
int	locus_compare (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Three-way comparison (spaceship operator <=>) for two loci in a genome. More...
int	locus_compare (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Three-way comparison (spaceship operator <=>) for two loci in a genome. More...
bool	locus_equal (GenomeLocus const &l, GenomeLocus const &r)
	Equality comparison (==) for two loci in a genome. More...
bool	locus_equal (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Equality comparison (==) for two loci in a genome. More...
bool	locus_equal (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Equality comparison (==) for two loci in a genome. More...
bool	locus_equal (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Equality comparison (==) for two loci in a genome. More...
bool	locus_greater (GenomeLocus const &l, GenomeLocus const &r)
	Greater than comparison (>) for two loci in a genome. More...
bool	locus_greater (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Greater than comparison (>) for two loci in a genome. More...
bool	locus_greater (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Greater than comparison (>) for two loci in a genome. More...
bool	locus_greater (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Greater than comparison (>) for two loci in a genome. More...
bool	locus_greater_or_equal (GenomeLocus const &l, GenomeLocus const &r)
	Greater than or equal comparison (>=) for two loci in a genome. More...
bool	locus_greater_or_equal (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Greater than or equal comparison (>=) for two loci in a genome. More...
bool	locus_greater_or_equal (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Greater than or equal comparison (>=) for two loci in a genome. More...
bool	locus_greater_or_equal (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Greater than or equal comparison (>=) for two loci in a genome. More...
bool	locus_inequal (GenomeLocus const &l, GenomeLocus const &r)
	Inequality comparison (!=) for two loci in a genome. More...
bool	locus_inequal (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Inequality comparison (!=) for two loci in a genome. More...
bool	locus_inequal (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Inequality comparison (!=) for two loci in a genome. More...
bool	locus_inequal (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Inequality comparison (!=) for two loci in a genome. More...
bool	locus_less (GenomeLocus const &l, GenomeLocus const &r)
	Less than comparison (<) for two loci in a genome. More...
bool	locus_less (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Less than comparison (<) for two loci in a genome. More...
bool	locus_less (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Less than comparison (<) for two loci in a genome. More...
bool	locus_less (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Less than comparison (<) for two loci in a genome. More...
bool	locus_less_or_equal (GenomeLocus const &l, GenomeLocus const &r)
	Less than or equal comparison (<=) for two loci in a genome. More...
bool	locus_less_or_equal (GenomeLocus const &l, std::string const &r_chromosome, size_t r_position)
	Less than or equal comparison (<=) for two loci in a genome. More...
bool	locus_less_or_equal (std::string const &l_chromosome, size_t l_position, GenomeLocus const &r)
	Less than or equal comparison (<=) for two loci in a genome. More...
bool	locus_less_or_equal (std::string const &l_chromosome, size_t l_position, std::string const &r_chromosome, size_t r_position)
	Less than or equal comparison (<=) for two loci in a genome. More...
bool	operator!= (GenomeLocus const &l, GenomeLocus const &r)
	Inequality comparison (!=) for two loci in a genome. More...
bool	operator< (GenomeLocus const &l, GenomeLocus const &r)
	Less than comparison (<) for two loci in a genome. More...
std::ostream &	operator<< (std::ostream &os, GenomeLocus const &locus)
bool	operator<= (GenomeLocus const &l, GenomeLocus const &r)
	Less than or equal comparison (<=) for two loci in a genome. More...
bool	operator== (GenomeLocus const &l, GenomeLocus const &r)
	Equality comparison (==) for two loci in a genome. More...
bool	operator> (GenomeLocus const &l, GenomeLocus const &r)
	Greater than comparison (>) for two loci in a genome. More...
bool	operator>= (GenomeLocus const &l, GenomeLocus const &r)
	Greater than or equal comparison (>=) for two loci in a genome. More...
std::string	to_string (GenomeLocus const &locus)