fastq_writer.cpp File Reference

#include "genesis/sequence/formats/fastq_writer.hpp"
#include "genesis/sequence/functions/quality.hpp"
#include "genesis/sequence/sequence_set.hpp"
#include "genesis/sequence/sequence.hpp"
#include "genesis/utils/core/fs.hpp"
#include "genesis/utils/io/output_stream.hpp"
#include <cassert>
#include <fstream>
#include <sstream>
#include <stdexcept>

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Namespaces
	genesis
	Container namespace for all symbols of genesis in order to keep them separate when used as a library.
	genesis::sequence

Functions
template<class StringType >
static void	fastq_writer_write_sequence_helper_ (StringType const &label, StringType const &sites, StringType const &quality, size_t line_length, bool repeat_label, std::ostream &os)
	Local function template that does the actual work. More...