A toolkit for working with phylogenetic data.
v0.24.0
distance.cpp File Reference

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Namespaces

 genesis
 Container namespace for all symbols of genesis in order to keep them separate when used as a library.
 
 genesis::utils
 

Functions

Matrix< double > euclidean_distance_matrix (Matrix< double > const &data)
 Calculate the pairwise euclidean distance matrix between the rows of a given matrix. More...
 
Matrix< double > manhattan_distance_matrix (Matrix< double > const &data)
 Calculate the pairwise manhatten distance matrix between the rows of a given matrix. More...
 
Matrix< double > maximum_distance_matrix (Matrix< double > const &data)
 Calculate the pairwise maximum distance matrix between the rows of a given matrix. More...
 
Matrix< double > p_norm_distance_matrix (Matrix< double > const &data, double p=2.0)
 Calculate the pairwise distance matrix between the rows of a given matrix. More...