NexusTaxa Class Reference

#include <genesis/utils/formats/nexus/taxa.hpp>

Inherits NexusBlock.

Detailed Description

Definition at line 61 of file taxa.hpp.

Public Member Functions
	NexusTaxa ()=default
	NexusTaxa (NexusTaxa &&)=default
	NexusTaxa (NexusTaxa const &)=default
virtual	~NexusTaxa () override=default
void	add_taxa (std::vector< std::string > const &taxa)
void	add_taxon (std::string const &name)
const_iterator	begin () const
std::string	block_name () const override
void	clear ()
bool	empty () const
const_iterator	end () const
bool	has_taxon (std::string const &name) const
NexusTaxa &	operator= (NexusTaxa &&)=default
NexusTaxa &	operator= (NexusTaxa const &)=default
size_t	size () const
void	swap (NexusTaxa &other)
void	to_stream (std::ostream &os) const override
Public Member Functions inherited from NexusBlock
	NexusBlock ()=default
	NexusBlock (NexusBlock &&)=default
	NexusBlock (NexusBlock const &)=default
virtual	~NexusBlock ()=default
NexusBlock &	operator= (NexusBlock &&)=default
NexusBlock &	operator= (NexusBlock const &)=default

Public Types
using	const_iterator = container::const_iterator
using	container = std::vector< std::string >

Friends
bool	operator!= (NexusTaxa const &lhs, NexusTaxa const &rhs)
bool	operator== (NexusTaxa const &lhs, NexusTaxa const &rhs)

Constructor & Destructor Documentation

NexusTaxa() [1/3]

NexusTaxa ( )

default

~NexusTaxa()

virtual ~NexusTaxa ( )

overridevirtualdefault

NexusTaxa() [2/3]

NexusTaxa ( NexusTaxa const &  )

default

NexusTaxa() [3/3]

NexusTaxa ( NexusTaxa &&  )

default

Member Function Documentation

add_taxa()

void add_taxa ( std::vector< std::string > const &  taxa )

inline

Definition at line 158 of file taxa.hpp.

add_taxon()

void add_taxon ( std::string const &  name )

inline

Definition at line 153 of file taxa.hpp.

begin()

const_iterator begin ( ) const

inline

Definition at line 137 of file taxa.hpp.

block_name()

std::string block_name ( ) const

inlineoverridevirtual

Implements NexusBlock.

Definition at line 180 of file taxa.hpp.

clear()

void clear ( )

inline

Definition at line 169 of file taxa.hpp.

empty()

bool empty ( ) const

inline

Definition at line 116 of file taxa.hpp.

end()

const_iterator end ( ) const

inline

Definition at line 142 of file taxa.hpp.

has_taxon()

bool has_taxon ( std::string const &  name ) const

inline

Definition at line 126 of file taxa.hpp.

operator=() [1/2]

NexusTaxa& operator= ( NexusTaxa &&  )

default

operator=() [2/2]

NexusTaxa& operator= ( NexusTaxa const &  )

default

size()

size_t size ( ) const

inline

Definition at line 121 of file taxa.hpp.

swap()

void swap ( NexusTaxa &  other )

inline

Definition at line 88 of file taxa.hpp.

to_stream()

void to_stream ( std::ostream &  os ) const

inlineoverridevirtual

Implements NexusBlock.

Definition at line 185 of file taxa.hpp.

Friends And Related Function Documentation

operator!=

bool operator!= ( NexusTaxa const &  lhs, NexusTaxa const &  rhs  )

friend

Definition at line 105 of file taxa.hpp.

operator==

bool operator== ( NexusTaxa const &  lhs, NexusTaxa const &  rhs  )

friend

Definition at line 100 of file taxa.hpp.

Member Typedef Documentation

const_iterator

using const_iterator = container::const_iterator

Definition at line 71 of file taxa.hpp.

container

using container = std::vector<std::string>

Definition at line 70 of file taxa.hpp.

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The documentation for this class was generated from the following file:

• taxa.hpp