FastaReader Member List

This is the complete list of members for FastaReader, including all inherited members.

FastaReader()	FastaReader
FastaReader(FastaReader const &)=default	FastaReader
FastaReader(FastaReader &&)=default	FastaReader
guess_abundances(bool value)	FastaReader
guess_abundances() const	FastaReader
operator=(FastaReader const &)=default	FastaReader
operator=(FastaReader &&)=default	FastaReader
parse_document(utils::InputStream &input_stream, SequenceSet &sequence_set) const	FastaReader
parse_sequence(utils::InputStream &input_stream, Sequence &sequence) const	FastaReader
parse_sequence_pedantic(utils::InputStream &input_stream, Sequence &sequence) const	FastaReader
parsing_method(ParsingMethod value)	FastaReader
parsing_method() const	FastaReader
ParsingMethod enum name	FastaReader
read(std::shared_ptr< utils::BaseInputSource > source) const	FastaReader
read(std::shared_ptr< utils::BaseInputSource > source, SequenceSet &sequence_set) const	FastaReader
read_dict(std::shared_ptr< utils::BaseInputSource > source) const	FastaReader
read_reference_genome(std::shared_ptr< utils::BaseInputSource > source, bool also_look_up_first_word=true) const	FastaReader
site_casing(SiteCasing value)	FastaReader
site_casing() const	FastaReader
SiteCasing enum name	FastaReader
valid_char_lookup()	FastaReader
valid_chars(std::string const &chars)	FastaReader
valid_chars() const	FastaReader
~FastaReader()=default	FastaReader