A library for working with phylogenetic and population genetic data.
v0.32.0
CommonTreeNewickWriter Member List

This is the complete list of members for CommonTreeNewickWriter, including all inherited members.

branch_length_precision() constCommonTreeNewickWriterPlugininline
branch_length_precision(int value)CommonTreeNewickWriterPlugininline
CommonTreeNewickWriter()CommonTreeNewickWriterinline
CommonTreeNewickWriterPlugin()=defaultCommonTreeNewickWriterPlugin
CommonTreeNewickWriterPlugin(CommonTreeNewickWriterPlugin const &)=defaultCommonTreeNewickWriterPlugin
CommonTreeNewickWriterPlugin(CommonTreeNewickWriterPlugin &&)=defaultCommonTreeNewickWriterPlugin
default_inner_name() constCommonTreeNewickWriterPlugininline
default_inner_name(std::string const &value)CommonTreeNewickWriterPlugininline
default_leaf_name() constCommonTreeNewickWriterPlugininline
default_leaf_name(std::string const &value)CommonTreeNewickWriterPlugininline
default_root_name() constCommonTreeNewickWriterPlugininline
default_root_name(std::string const &value)CommonTreeNewickWriterPlugininline
edge_to_element(TreeEdge const &edge, NewickBrokerElement &element) constCommonTreeNewickWriterPlugininline
edge_to_element_function typedefNewickWriter
edge_to_element_pluginsNewickWriter
enable_branch_lengths(bool value)CommonTreeNewickWriterPlugininline
enable_branch_lengths() constCommonTreeNewickWriterPlugininline
enable_names(bool value)CommonTreeNewickWriterPlugininline
enable_names() constCommonTreeNewickWriterPlugininline
finish_writing_function typedefNewickWriter
finish_writing_pluginsNewickWriter
force_quotation_marks(bool value)NewickWriterinline
force_quotation_marks() constNewickWriterinline
line_length(size_t value)NewickWriterinline
line_length() constNewickWriterinline
NewickWriter()=defaultNewickWriter
NewickWriter(NewickWriter const &)=defaultNewickWriter
NewickWriter(NewickWriter &&)=defaultNewickWriter
node_to_element(TreeNode const &node, NewickBrokerElement &element) constCommonTreeNewickWriterPlugininline
node_to_element_function typedefNewickWriter
node_to_element_pluginsNewickWriter
genesis::operator=(NewickWriter const &)=defaultNewickWriter
genesis::operator=(NewickWriter &&)=defaultNewickWriter
genesis::tree::CommonTreeNewickWriterPlugin::operator=(CommonTreeNewickWriterPlugin const &)=defaultCommonTreeNewickWriterPlugin
genesis::tree::CommonTreeNewickWriterPlugin::operator=(CommonTreeNewickWriterPlugin &&)=defaultCommonTreeNewickWriterPlugin
prepare_writing_function typedefNewickWriter
prepare_writing_pluginsNewickWriter
quotation_mark(char value)NewickWriterinline
quotation_mark() constNewickWriterinline
register_with(NewickWriter &writer) constCommonTreeNewickWriterPlugininline
replace_invalid_chars() constCommonTreeNewickWriterPlugininline
replace_invalid_chars(bool value)CommonTreeNewickWriterPlugininline
self_type typedefCommonTreeNewickWriterPlugin
set_default_names(std::string const &value)CommonTreeNewickWriterPlugininline
to_string(Tree const &tree) constNewickWriter
trailing_new_line(bool value)NewickWriterinline
trailing_new_line() constNewickWriterinline
tree_to_broker(Tree const &tree) constNewickWriter
use_default_names() constCommonTreeNewickWriterPlugininline
use_default_names(bool value)CommonTreeNewickWriterPlugininline
write(Tree const &tree, std::shared_ptr< utils::BaseOutputTarget > target) constNewickWriter
write(TreeSet const &tree_set, std::shared_ptr< utils::BaseOutputTarget > target, bool with_names=false) constNewickWriter
write(NewickBroker const &broker, std::shared_ptr< utils::BaseOutputTarget > target) constNewickWriter
write_comments(bool value)NewickWriterinline
write_comments() constNewickWriterinline
write_names(bool value)NewickWriterinline
write_names() constNewickWriterinline
write_tags(bool value)NewickWriterinline
write_tags() constNewickWriterinline
write_values(bool value)NewickWriterinline
write_values() constNewickWriterinline
~CommonTreeNewickWriterPlugin()=defaultCommonTreeNewickWriterPluginvirtual
~NewickWriter()=defaultNewickWritervirtual