A library for working with phylogenetic and population genetic data.
v0.27.0
SiteCounts Member List

This is the complete list of members for SiteCounts, including all inherited members.

add_sequence(Sequence const &sequence, bool use_abundance=true)SiteCounts
add_sequence(std::string const &sites, CountsIntType weight=1)SiteCounts
add_sequences(SequenceSet const &sequences, bool use_abundances=true)SiteCounts
added_sequences_count() constSiteCounts
characters() constSiteCounts
clear()SiteCounts
clear_counts()SiteCounts
count_at(size_t character_index, size_t site_index) constSiteCounts
count_of(char character, size_t site_index) constSiteCounts
CountsIntType typedefSiteCounts
length() constSiteCounts
operator=(SiteCounts const &)=defaultSiteCounts
operator=(SiteCounts &&)=defaultSiteCounts
SiteCounts()=defaultSiteCounts
SiteCounts(std::string const &characters, size_t length)SiteCounts
SiteCounts(SiteCounts const &)=defaultSiteCounts
SiteCounts(SiteCounts &&)=defaultSiteCounts
~SiteCounts()=defaultSiteCounts