A library for working with phylogenetic and population genetic data.
v0.27.0
VcfRecord Member List
This is the complete list of members for
VcfRecord
, including all inherited members.
assert_format
(std::string const &id) const
VcfRecord
assert_format
(char const *id) const
VcfRecord
assert_info
(std::string const &id) const
VcfRecord
assert_info
(char const *) const
VcfRecord
at
() const
VcfRecord
begin_format_float
(std::string const &id) const
VcfRecord
begin_format_genotype
() const
VcfRecord
begin_format_int
(std::string const &id) const
VcfRecord
begin_format_string
(std::string const &id) const
VcfRecord
data
()
VcfRecord
inline
data
() const
VcfRecord
inline
end_format_float
() const
VcfRecord
end_format_genotype
() const
VcfRecord
end_format_int
() const
VcfRecord
end_format_string
() const
VcfRecord
get_alternative
(size_t index) const
VcfRecord
get_alternatives
() const
VcfRecord
get_alternatives_count
() const
VcfRecord
get_chromosome
() const
VcfRecord
get_filter_ids
() const
VcfRecord
get_format_float
(std::string const &id) const
VcfRecord
get_format_genotype
() const
VcfRecord
get_format_ids
() const
VcfRecord
get_format_int
(std::string const &id) const
VcfRecord
get_format_string
(std::string const &id) const
VcfRecord
get_id
() const
VcfRecord
get_info_flag
(std::string const &id) const
VcfRecord
get_info_float
(std::string const &id) const
VcfRecord
get_info_float
(std::string const &id, std::vector< double > &destination) const
VcfRecord
get_info_ids
() const
VcfRecord
get_info_int
(std::string const &id) const
VcfRecord
get_info_int
(std::string const &id, std::vector< int32_t > &destination) const
VcfRecord
get_info_string
(std::string const &id) const
VcfRecord
get_info_string
(std::string const &id, std::string &destination) const
VcfRecord
get_position
() const
VcfRecord
get_quality
() const
VcfRecord
get_reference
() const
VcfRecord
get_variant
(size_t index) const
VcfRecord
get_variant_count
() const
VcfRecord
get_variant_type
(size_t alt_index) const
VcfRecord
get_variant_types
() const
VcfRecord
get_variants
() const
VcfRecord
has_filter
(std::string const &filter) const
VcfRecord
has_format
(std::string const &id) const
VcfRecord
has_format
(char const *id) const
VcfRecord
has_info
(std::string const &id) const
VcfRecord
has_info
(char const *id) const
VcfRecord
header
()
VcfRecord
inline
header
() const
VcfRecord
inline
is_snp
() const
VcfRecord
operator&
(VcfRecord::VariantType a, VcfRecord::VariantType b)
VcfRecord
friend
operator=
(VcfRecord const &)=delete
VcfRecord
operator=
(VcfRecord &&)
VcfRecord
pass_filter
() const
VcfRecord
read_next
(HtsFile &source)
VcfRecord
swap
(VcfRecord &other)
VcfRecord
unpack
() const
VcfRecord
VariantType
enum name
VcfRecord
VcfRecord
()
VcfRecord
VcfRecord
(VcfHeader &header)
VcfRecord
explicit
VcfRecord
(VcfHeader &header, ::bcf1_t *bcf1)
VcfRecord
VcfRecord
(VcfRecord const &)=delete
VcfRecord
VcfRecord
(VcfRecord &&)
VcfRecord
~VcfRecord
()
VcfRecord
Generated on Sat Jun 4 2022 17:08:40 for genesis by
1.8.17