SimplePileupReader Member List

This is the complete list of members for SimplePileupReader, including all inherited members.

min_base_quality() const	SimplePileupReader	inline
min_base_quality(size_t value)	SimplePileupReader	inline
operator=(self_type const &)=default	SimplePileupReader
operator=(self_type &&)=default	SimplePileupReader
parse_line_record(utils::InputStream &input_stream, Record &record) const	SimplePileupReader
parse_line_record(utils::InputStream &input_stream, Record &record, std::vector< bool > const &sample_filter) const	SimplePileupReader
parse_line_variant(utils::InputStream &input_stream, Variant &variant) const	SimplePileupReader
parse_line_variant(utils::InputStream &input_stream, Variant &variant, std::vector< bool > const &sample_filter) const	SimplePileupReader
quality_encoding() const	SimplePileupReader	inline
quality_encoding(sequence::QualityEncoding value)	SimplePileupReader	inline
read_records(std::shared_ptr< utils::BaseInputSource > source) const	SimplePileupReader
read_records(std::shared_ptr< utils::BaseInputSource > source, std::vector< bool > const &sample_filter) const	SimplePileupReader
read_variants(std::shared_ptr< utils::BaseInputSource > source) const	SimplePileupReader
read_variants(std::shared_ptr< utils::BaseInputSource > source, std::vector< bool > const &sample_filter) const	SimplePileupReader
self_type typedef	SimplePileupReader
SimplePileupReader()=default	SimplePileupReader
SimplePileupReader(self_type const &)=default	SimplePileupReader
SimplePileupReader(self_type &&)=default	SimplePileupReader
strict_bases() const	SimplePileupReader	inline
strict_bases(bool value)	SimplePileupReader	inline
with_ancestral_base() const	SimplePileupReader	inline
with_ancestral_base(bool value)	SimplePileupReader	inline
with_quality_string() const	SimplePileupReader	inline
with_quality_string(bool value)	SimplePileupReader	inline
~SimplePileupReader()=default	SimplePileupReader