A library for working with phylogenetic and population genetic data.
v0.27.0
SamVariantInputIterator Member List
This is the complete list of members for
SamVariantInputIterator
, including all inherited members.
begin
() const
SamVariantInputIterator
inline
difference_type
typedef
SamVariantInputIterator
end
() const
SamVariantInputIterator
inline
flags_exclude_all
() const
SamVariantInputIterator
inline
flags_exclude_all
(uint32_t value)
SamVariantInputIterator
inline
flags_exclude_any
() const
SamVariantInputIterator
inline
flags_exclude_any
(uint32_t value)
SamVariantInputIterator
inline
flags_include_all
() const
SamVariantInputIterator
inline
flags_include_all
(uint32_t value)
SamVariantInputIterator
inline
flags_include_any
() const
SamVariantInputIterator
inline
flags_include_any
(uint32_t value)
SamVariantInputIterator
inline
input_file
() const
SamVariantInputIterator
inline
input_file
(std::string const &value)
SamVariantInputIterator
inline
inverse_rg_tag_filter
() const
SamVariantInputIterator
inline
inverse_rg_tag_filter
(bool value)
SamVariantInputIterator
inline
iterator_category
typedef
SamVariantInputIterator
max_accumulation_depth
() const
SamVariantInputIterator
inline
max_accumulation_depth
(int value)
SamVariantInputIterator
inline
max_depth
() const
SamVariantInputIterator
inline
max_depth
(int value)
SamVariantInputIterator
inline
min_base_qual
() const
SamVariantInputIterator
inline
min_base_qual
(int value)
SamVariantInputIterator
inline
min_depth
() const
SamVariantInputIterator
inline
min_depth
(int value)
SamVariantInputIterator
inline
min_map_qual
() const
SamVariantInputIterator
inline
min_map_qual
(int value)
SamVariantInputIterator
inline
operator=
(SamVariantInputIterator const &)=default
SamVariantInputIterator
operator=
(SamVariantInputIterator &&)=default
SamVariantInputIterator
pointer
typedef
SamVariantInputIterator
reference
typedef
SamVariantInputIterator
rg_tag_filter
() const
SamVariantInputIterator
inline
rg_tag_filter
(std::unordered_set< std::string > const &value)
SamVariantInputIterator
inline
SamVariantInputIterator
()
SamVariantInputIterator
inline
SamVariantInputIterator
(std::string const &input_file)
SamVariantInputIterator
inline
explicit
SamVariantInputIterator
(std::string const &input_file, std::unordered_set< std::string > const &rg_tag_filter, bool inverse_rg_tag_filter=false)
SamVariantInputIterator
SamVariantInputIterator
(SamVariantInputIterator const &)=default
SamVariantInputIterator
SamVariantInputIterator
(SamVariantInputIterator &&)=default
SamVariantInputIterator
self_type
typedef
SamVariantInputIterator
split_by_rg
() const
SamVariantInputIterator
inline
split_by_rg
(bool value)
SamVariantInputIterator
inline
value_type
typedef
SamVariantInputIterator
with_unaccounted_rg
() const
SamVariantInputIterator
inline
with_unaccounted_rg
(bool value)
SamVariantInputIterator
inline
~SamVariantInputIterator
()=default
SamVariantInputIterator
Generated on Sat Jun 4 2022 17:08:40 for genesis by
1.8.17